Package: iBST 1.2
iBST: Improper Bagging Survival Tree
Fit a full or subsampling bagging survival tree on a mixture of population (susceptible and nonsusceptible) using either a pseudo R2 criterion or an adjusted Logrank criterion. The predictor is evaluated using the Out Of Bag Integrated Brier Score (IBS) and several scores of importance are computed for variable selection. The thresholds values for variable selection are computed using a nonparametric permutation test. See 'Cyprien Mbogning' and 'Philippe Broet' (2016)<doi:10.1186/s12859-016-1090-x> for an overview about the methods implemented in this package.
Authors:
iBST_1.2.tar.gz
iBST_1.2.zip(r-4.5)iBST_1.2.zip(r-4.4)iBST_1.2.zip(r-4.3)
iBST_1.2.tgz(r-4.4-x86_64)iBST_1.2.tgz(r-4.4-arm64)iBST_1.2.tgz(r-4.3-x86_64)iBST_1.2.tgz(r-4.3-arm64)
iBST_1.2.tar.gz(r-4.5-noble)iBST_1.2.tar.gz(r-4.4-noble)
iBST_1.2.tgz(r-4.4-emscripten)iBST_1.2.tgz(r-4.3-emscripten)
iBST.pdf |iBST.html✨
iBST/json (API)
# Install 'iBST' in R: |
install.packages('iBST', repos = c('https://cyprien84.r-universe.dev', 'https://cloud.r-project.org')) |
- burn - Burn dataset
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 2 years agofrom:b443d3bb10. Checks:OK: 9. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 22 2024 |
R-4.5-win-x86_64 | OK | Nov 22 2024 |
R-4.5-linux-x86_64 | OK | Nov 22 2024 |
R-4.4-win-x86_64 | OK | Nov 22 2024 |
R-4.4-mac-x86_64 | OK | Nov 22 2024 |
R-4.4-mac-aarch64 | OK | Nov 22 2024 |
R-4.3-win-x86_64 | OK | Nov 22 2024 |
R-4.3-mac-x86_64 | OK | Nov 22 2024 |
R-4.3-mac-aarch64 | OK | Nov 22 2024 |
Exports:Bagg_pred_SurvBagg_Survimproper_treepermute_select_survPseudoR2.Curercpp_hello_worldtree2indicators
Readme and manuals
Help Manual
Help page | Topics |
---|---|
improper Bagging Subsample Survival Tree | iBST-package iBST |
Bagging survival tree prediction | Bagg_pred_Surv |
Bagging improper survival trees | Bagg_Surv |
burn dataset | burn |
imprper survival tree | improper_tree |
permutation variable selection | permute_select_surv |
Pseudo R2 criterion | PseudoR2.Cure |
Simple function using Rcpp | rcpp_hello_world |
From a tree to indicators (or dummy variables) | tree2indicators |